Dyno Phi

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Predict a structure

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Which model folds what, what the alignment is worth, how to read pLDDT, PAE and ipTM, and when to compare predictors. On the transferrin receptor and a textbook complex.

Design a binder

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An example VHH campaign against transferrin receptor 1. The target and the epitope are real; the pilot, the batch and the lab results are illustrative. Choose the site, pilot the generators, run the batch, score, review, and read what the lab says.

Redesign a sequence

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Score every residue of a structure, choose what to redesign and what to keep, design new sequences with four models, fold them back and read what came out. On a VHH bound to transferrin receptor 1.

Minimize a protein

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Shrink a protein or construct while keeping its function: what to hold fixed, what to let go, and how to check the result.

Design a payload

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Design cargo for capsid delivery, sized to what a capsid can carry.